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Efficient Parameter Estimation for DNA Kinetics Modeled as Continuous-Time Markov Chains.

, , , , , and . DNA, volume 11648 of Lecture Notes in Computer Science, page 80-99. Springer, (2019)

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Probabilistically Checkable Debate Systems and Nonapproximability of PSPACE-Hard Functions., , , and . Chic. J. Theor. Comput. Sci., (1995)An O(n5) Algorithm for MFE Prediction of Kissing Hairpins and 4-Chains in Nucleic Acids., , and . J. Comput. Biol., 16 (6): 803-815 (2009)On the undecidability of probabilistic planning and related stochastic optimization problems., , and . Artif. Intell., 147 (1-2): 5-34 (2003)Reachability Bounds for Chemical Reaction Networks and Strand Displacement Systems., , and . DNA, volume 7433 of Lecture Notes in Computer Science, page 43-57. Springer, (2012)NP-Completeness of the Direct Energy Barrier Problem without Pseudoknots., , , and . DNA, volume 5877 of Lecture Notes in Computer Science, page 106-115. Springer, (2009)ViDa: Visualizing DNA hybridization trajectories with biophysics-informed deep graph embeddings., , , , and . CoRR, (2023)Efficient codon optimization with motif engineering., and . J. Discrete Algorithms, (2012)Visualizing DNA reaction trajectories with deep graph embedding approaches., , and . CoRR, (2023)Isometric Hamming embeddings of weighted graphs., , , , and . Discret. Appl. Math., (June 2023)Upper and Lower Bounds for Selection in the Mesh., and . Algorithmica, 20 (1): 1-30 (1998)