This protocol provides detailed instructions on Quality Control, EWAS, and CpG island signature discovery with Illumina Infinitum MethylationEPIC and Infinium Human Methylation 450K BeadChip data. R package minfi and caret was used in this analysis.
D. Scott, S. Al-Jibouri, M. Mawdesley, and G. Long. International Technology, Education and Development Conference (INTED 2009), March 9-11, 2009, Valencia, Spain, (2009)