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Principles of ChIP-seq Data Analysis Illustrated with Examples.

, , and . IWBBIO, page 682-694. Copicentro Editorial, (2014)

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Influence of Rotational Nucleosome Positioning on Transcription Start Site Selection in Animal Promoters., , and . PLoS Comput. Biol., (2016)MGA repository: a curated data resource for ChIP-seq and other genome annotated data., , , , and . Nucleic Acids Res., 46 (Database-Issue): D175-D180 (2018)Transcription factor binding and nucleosome positioning are alternative pathways for transcription start site selection in eukaryotic promoters., , and . IWBBIO, page 695-706. Copicentro Editorial, (2014)The Eukaryotic Promoter Database: expansion of EPDnew and new promoter analysis tools., , , and . Nucleic Acids Res., 43 (Database-Issue): 92-96 (2015)EPD and EPDnew, high-quality promoter resources in the next-generation sequencing era., , , and . Nucleic Acids Res., 41 (Database-Issue): 157-164 (2013)Principles of ChIP-seq Data Analysis Illustrated with Examples., , and . IWBBIO, page 682-694. Copicentro Editorial, (2014)The eukaryotic promoter database in its 30th year: focus on non-vertebrate organisms., , , , and . Nucleic Acids Res., 45 (Database-Issue): D51-D55 (2017)EPD in 2020: enhanced data visualization and extension to ncRNA promoters., , , , and . Nucleic Acids Res., 48 (Database-Issue): D65-D69 (2020)Computational identification and experimental characterization of preferred downstream positions in human core promoters., , , , , and . PLoS Comput. Biol., (2021)