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COLOMBOS v3.0: leveraging gene expression compendia for cross-species analyses., , , , , , , , , and 3 other author(s). Nucleic Acids Res., 44 (Database-Issue): 620-623 (2016)CONTIGuator: a bacterial genomes finishing tool for structural insights on draft genomes., , , and . Source Code for Biology and Medicine, (2011)Evolution of Intra-specific Regulatory Networks in a Multipartite Bacterial Genome., , , , , , , , , and 4 other author(s). PLoS Comput. Biol., (2015)Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilis, , , , , , , , , and 5 other author(s). Cell Systems, 4 (3): 291--305.e7 (March 2017)pyseer: a comprehensive tool for microbial pangenome-wide association studies., , , , and . Bioinform., 34 (24): 4310-4312 (2018)ChemGAPP: a tool for chemical genomics analysis and phenotypic profiling., , , , and . Bioinform., (April 2023)Nutritional preferences of human gut bacteria reveal their metabolic idiosyncrasies, , , , , , , , , and 2 other author(s). Nature Microbiology, (Mar 19, 2018)