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A modeling and simulation language for biological cells with coupled mechanical and chemical processes., and . CoRR, (2017)Improving the realism of the cellular Potts model in simulations of biological cells, , , , and . Physica A: Statistical Mechanics and its Applications, 329 (3-4): 451--458 (Nov 15, 2003)Contact-Inhibited Chemotaxis in De Novo and Sprouting Blood-Vessel Growth., , , and . PLoS Comput. Biol., (2008)Non-Turing stripes and spots: a novel mechanism for biological cell clustering, , and . Physica A: Statistical Mechanics and its Applications, (Oct 1, 2004)Adhesion between cells, diffusion of growth factors, and elasticity of the AER produce the paddle shape of the chick limb, , , and . Physica A: Statistical and Theoretical Physics, (Jan 1, 2007)Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology., , , , , , , , , and 3 other author(s). Briefings Bioinform., (2022)Workflows for parameter studies of multi-cell modeling., , , , and . SpringSim, page 94. SCS/ACM, (2010)Special Issue on Multiscale Modeling in Biology., , , and . Multiscale Model. Simul., (2005)A Framework for Three-Dimensional Simulation of Morphogenesis., , , , , , , , and . IEEE ACM Trans. Comput. Biol. Bioinform., 2 (4): 273-288 (2005)Analyzing the Performance of Deep Encoder-Decoder Networks as Surrogates for a Diffusion Equation., , and . CoRR, (2023)