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Progressive Calibration and Averaging for Tandem Mass Spectrometry Statistical Confidence Estimation: Why Settle for a Single Decoy?, and . RECOMB, volume 10229 of Lecture Notes in Computer Science, page 99-116. (2017)Designing seeds for similarity search in genomic DNA., , and . J. Comput. Syst. Sci., 70 (3): 342-363 (2005)A Symmetric Length-Aware Enrichment Test., and . RECOMB, volume 9029 of Lecture Notes in Computer Science, page 224-242. Springer, (2015)FAST: Fourier transform based algorithms for significance testing of ungapped multiple alignments., and . Bioinform., 24 (4): 577-578 (2008)Semi-supervised Learning While Controlling the FDR with an Application to Tandem Mass Spectrometry Analysis., , , and . RECOMB, volume 14758 of Lecture Notes in Computer Science, page 448-453. Springer, (2024)Genome-Wide Analysis of Bacterial Promoter Regions., , , and . Pacific Symposium on Biocomputing, page 29-40. (2003)Computing the P-value of the information content from an alignment of multiple sequences., , and . ISMB (Supplement of Bioinformatics), page 311-318. (2005)A Faster Reliable Algorithm to Estimate the p-Value of the Multinomial llr Statistic., and . WABI, volume 3240 of Lecture Notes in Computer Science, page 111-122. Springer, (2004)Accurate pairwise convolutions of non-negative vectors via FFT., and . Comput. Stat. Data Anal., (2016)Alignment Constrained Sampling., and . J. Comput. Biol., 18 (2): 155-168 (2011)