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Statistical framework to determine indel-length distribution., , , , , and . Bioinform., (February 2024)Ancestral sequence reconstruction: accounting for structural information by averaging over replacement matrices., and . Bioinform., 35 (15): 2562-2568 (2019)Selecton: a server for detecting evolutionary forces at a single amino-acid site., , , , and . Bioinform., 21 (9): 2101-2103 (2005)GUIDANCE: a web server for assessing alignment confidence scores., , , , , and . Nucleic Acids Res., 38 (Web-Server-Issue): 23-28 (2010)CoPAP: Coevolution of Presence-Absence Patterns., , , , and . Nucleic Acids Res., 41 (Webserver-Issue): 232-237 (2013)Towards realistic codon models: among site variability and dependency of synonymous and non-synonymous rates., , , and . ISMB/ECCB (Supplement of Bioinformatics), page 319-327. (2007)Evolutionary Modeling of Rate Shifts Reveals Specificity Determinants in HIV-1 Subtypes., , , , , , and . PLoS Comput. Biol., (2008)Pepitope: epitope mapping from affinity-selected peptides., , , , , , , , , and 2 other author(s). Bioinform., 23 (23): 3244-3246 (2007)Phylogeny reconstruction: increasing the accuracy of pairwise distance estimation using Bayesian inference of evolutionary rates., , , and . Bioinform., 23 (2): 136-141 (2007)Uncovering the co-evolutionary network among prokaryotic genes., , , and . Bioinform., 28 (18): 389-394 (2012)