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Computational Challenges in Cell Simulation: A Software Engineering Approach., , , , , and . IEEE Intell. Syst., 17 (5): 64-71 (2002)The E-CELL project: towards integrative simulation of cellular processes., , , , , , , , , and 1 other author(s). RECOMB, page 290-298. ACM, (2000)Multiple high-throughput analyses monitor the response of E. coli to perturbations, , , , , , , , , and 19 other author(s). Science, (2007)Operon structure optimization by random self-assembly., , , , , and . Nat. Comput., 9 (1): 173-181 (2010)Reconstruction of Insulin Signal Flow from Phosphoproteome and Metabolome Data, , , , , , , , , and 8 other author(s). Cell Rep., (2014)Implementing in vivo Cellular Automata using Toggle Switch and Inter-Bacteria Communication Mechanism., , , and . BIONETICS, page 322-325. ICST / IEEE, (2007)A microarray data-based semi-kinetic method for predicting quantitative dynamics of genetic networks., , , , and . BMC Bioinform., (2005)The selective control of glycolysis, gluconeogenesis and glycogenesis by temporal insulin patterns, , , , , , and . Molecular Systems Biology, (May 14, 2013)Trans-Omics: How To Reconstruct Biochemical Networks Across Multiple ‘Omic' Layers, , , and . Trends Biotechnol., 34 (4): 276--290 (April 2016)E-CELL: software environment for whole-cell simulation., , , , , , , , , and 1 other author(s). Bioinform., 15 (1): 72-84 (1999)