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Edit Distance with Duplications and Contractions Revisited.

, , , and . CPM, volume 6661 of Lecture Notes in Computer Science, page 441-454. Springer, (2011)

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Sparse RNA Folding: Time and Space Efficient Algorithms., , , and . CPM, volume 5577 of Lecture Notes in Computer Science, page 249-262. Springer, (2009)Rich Parameterization Improves RNA Structure Prediction., , , and . J. Comput. Biol., 18 (11): 1525-1542 (2011)Reconstructing Breakage Fusion Bridge Architectures Using Noisy Copy Numbers., and . J. Comput. Biol., 22 (6): 577-594 (2015)Reducing the worst case running times of a family of RNA and CFG problems, using Valiant's approach., , and . Algorithms Mol. Biol., (2011)Evaluating genome architecture of a complex region via generalized bipartite matching., , , and . BMC Bioinform., 14 (S-5): S13 (2013)RNA Tree Comparisons via Unrooted Unordered Alignments., , , , , and . WABI, volume 7534 of Lecture Notes in Computer Science, page 135-148. Springer, (2012)An algorithmic approach for breakage-fusion-bridge detection in tumor genomes., , and . Proc. Natl. Acad. Sci. USA, 110 (14): 5546-5551 (2013)Reducing the Worst Case Running Times of a Family of RNA and CFG Problems, Using Valiant's Approach., , and . WABI, volume 6293 of Lecture Notes in Computer Science, page 65-77. Springer, (2010)Sparse RNA folding: Time and space efficient algorithms., , , and . J. Discrete Algorithms, 9 (1): 12-31 (2011)Have your spaghetti and eat it too: evolutionary algorithmics and post-evolutionary analysis., , , and . Genet. Program. Evolvable Mach., 12 (2): 121-160 (2011)