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A simple alphabet-independent FM-index.

, , , and . Stringology, page 231-245. Department of Computer Science and Engineering, Faculty of Electrical Engineering, Czech Technical University, (2005)

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An In-Memory XQuery/XPath Engine over a Compressed Structured Text Representation., , , , , and . Structure-Based Compression of Complex Massive Data, volume 08261 of Dagstuhl Seminar Proceedings, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, Germany, (2008)Rotation and lighting invariant template matching., , and . Inf. Comput., 205 (7): 1096-1113 (2007)Compressed representations of sequences and full-text indexes., , , and . ACM Trans. Algorithms, 3 (2): 20 (2007)Algorithms and Complexity on Indexing Founder Graphs., , , , , and . Algorithmica, 85 (6): 1586-1623 (June 2023)Algorithms and Complexity on Indexing Elastic Founder Graphs., , , , , and . ISAAC, volume 212 of LIPIcs, page 20:1-20:18. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, (2021)Missing pattern discovery., , , and . J. Discrete Algorithms, 9 (2): 153-165 (2011)Bit-parallel sequence-to-graph alignment., , and . Bioinform., 35 (19): 3599-3607 (2019)Editorial: Special Issue on Algorithms for Sequence Analysis and Storage.. Algorithms, 7 (1): 186-187 (2014)Indexing Finite Language Representation of Population Genotypes, , and . CoRR, (2010)Applying the Positional Burrows-Wheeler Transform to all-pairs Hamming distance., and . Inf. Process. Lett., (2019)