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L.U.St: a tool for approximated maximum likelihood supertree reconstruction., , , and . BMC Bioinform., (2014)AQUA: automated quality improvement for multiple sequence alignments., , , , and . Bioinform., 26 (2): 263-265 (2010)Spherical: an iterative workflow for assembling metagenomic datasets., and . BMC Bioinform., 19 (1): 20:1-20:8 (2018)No one tool to rule them all: prokaryotic gene prediction tool annotations are highly dependent on the organism of study., , , , and . Bioinform., 38 (5): 1198-1207 (2022)eggNOG v4.0: nested orthology inference across 3686 organisms., , , , , , , , , and 3 other author(s). Nucleic Acids Res., 42 (Database-Issue): 231-239 (2014)Snpdat: Easy and rapid annotation of results from de novo snp discovery projects for model and non-model organisms., and . BMC Bioinform., (2013)STRING 8 - a global view on proteins and their functional interactions in 630 organisms., , , , , , , , , and 2 other author(s). Nucleic Acids Res., 37 (Database-Issue): 412-416 (2009)Identifying Single Copy Orthologs in Metazoa., , , , , and . PLoS Comput. Biol., (2011)Toward automatic reconstruction of a highly resolved tree of life, , , , , and . Science (New York, N.Y.), 311 (5765): 1283--7 (March 2006)PMID: 16513982.On the complexity of haplotyping a microbial community., , , , , and . Bioinform., 37 (10): 1360-1366 (2021)