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Chaining for accurate alignment of erroneous long reads to acyclic variation graphs.

, , , , and . Bioinform., (August 2023)

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Safe and Complete Algorithms for Dynamic Programming Problems, with an Application to RNA Folding., , and . CPM, volume 128 of LIPIcs, page 8:1-8:16. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, (2019)Correction of sequencing errors in a mixed set of reads.. Bioinform., 26 (10): 1284-1290 (2010)LoRDEC: accurate and efficient long read error correction., and . Bioinform., 30 (24): 3506-3514 (2014)Correcting errors in short reads by multiple alignments., and . Bioinform., 27 (11): 1455-1461 (2011)Identification of Variant Compositions in Related Strains Without Reference., , and . AlCoB, volume 9702 of Lecture Notes in Computer Science, page 158-170. Springer, (2016)Fast and accurate correction of optical mapping data via spaced seeds., , , , and . Bioinform., 36 (9): 2974 (2020)Chaining for accurate alignment of erroneous long reads to acyclic variation graphs., , , , and . Bioinform., (August 2023)HGGA: hierarchical guided genome assembler., and . BMC Bioinform., 23 (1): 167 (2022)Indexing Variable Length Substrings for Exact and Approximate Matching., and . SPIRE, volume 5721 of Lecture Notes in Computer Science, page 214-221. Springer, (2009)Space-efficient computation of k-mer dictionaries for large values of k., , and . Algorithms Mol. Biol., 19 (1): 14 (December 2024)