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Fast alignment of reads to a variation graph with application to SNP detection.

, and . J. Integr. Bioinform., (2021)

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Efficient Hashing of Multiple Spaced Seeds with Application., , , and . BIOINFORMATICS, page 155-162. SCITEPRESS, (2023)MetaProb 2: Improving Unsupervised Metagenomic Binning with Efficient Reads Assembly Using Minimizers., , and . ICCABS, volume 12686 of Lecture Notes in Computer Science, page 15-25. Springer, (2020)Off-Line Compression by Extensible Motifs., , and . DCC, page 450. IEEE Computer Society, (2005)Motifs in Ziv-Lempel-Welch Clef., , and . Data Compression Conference, page 72-81. IEEE Computer Society, (2004)Alignment-free phylogeny of whole genomes using underlying subwords., and . Algorithms Mol. Biol., (2012)On the comparison of regulatory sequences with multiple resolution Entropic Profiles., and . BMC Bioinform., (2016)Conservative extraction of over-represented extensible motifs., , and . ISMB (Supplement of Bioinformatics), page 9-18. (2005)Assembly-Free Techniques for NGS Data., and . Algorithms for Next-Generation Sequencing Data, Springer, (2017)Efficient k-mer Indexing with Application to Mapping-free SNP Genotyping., , and . BIOINFORMATICS, page 62-70. SCITEPRESS, (2022)Better quality score compression through sequence-based quality smoothing., and . BMC Bioinform., 20-S (9): 302:1-302:11 (2019)