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Parallel Seed-Based Approach to Protein Structure Similarity Detection.

, , , , and . PPAM (2), volume 8385 of Lecture Notes in Computer Science, page 278-287. Springer, (2013)

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Algorithm engineering for optimal alignment of protein structure distance matrices., , and . Optim. Lett., 5 (3): 421-433 (2011)Optimal Orthogonal Tiling of 2-D Iterations., and . J. Parallel Distributed Comput., 45 (2): 159-165 (1997)Complete assembly of circular and chloroplast genomes based on global optimization., , , and . J. Bioinform. Comput. Biol., 17 (3): 1950014:1-1950014:23 (2019)A sparse knapsack algo-tech-cuit and its synthesis., and . ASAP, page 302-313. IEEE, (1994)Protein Threading: From Mathematical Models to Parallel Implementations., , and . INFORMS J. Comput., 16 (4): 393-405 (2004)Optimal tiling for the RNA base pairing problem., , , , , and . SPAA, page 173-182. ACM, (2002)Optimal Orthogonal Tiling., , and . Euro-Par, volume 1470 of Lecture Notes in Computer Science, page 480-490. Springer, (1998)Global Optimization for Scaffolding and Completing Genome Assemblies., , , and . Electron. Notes Discret. Math., (2018)Two-dimensional orthogonal tiling: from theory to practice., , and . HiPC, page 225-231. IEEE Computer Society, (1996)Assembling Close Strains in Metagenome Assemblies Using Discrete Optimization., , and . BIOSTEC (1), page 347-356. SCITEPRESS, (2024)