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Finding Significant Matches of Position Weight Matrices in Linear Time.

, , and . IEEE ACM Trans. Comput. Biol. Bioinform., 8 (1): 69-79 (2011)

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On the Optimal Assignment of Attribute to Passes in Multi-pass Attribute Evaluators, and . 7th Int. Coll. on Automata, Languages and Programming, volume 85 of Lecture Notes in Computer Science, Springer-Verlag, New York--Heidelberg--Berlin, Noordwijkerhout.(July 1980)The Computational Complexity of Orientation Search in Cryo-Electron Microscopy., , and . International Conference on Computational Science, volume 3036 of Lecture Notes in Computer Science, page 231-238. Springer, (2004)LALR(k) Testing is PSPACE-Complete, and . STOC, page 202-206. ACM, (1981)Longest common substrings with k mismatches., , , and . CoRR, (2014)MDL learning of unions of simple pattern languages from positive examples., , and . EuroCOLT, volume 904 of Lecture Notes in Computer Science, page 252-260. Springer, (1995)Finding Feasible Pathways in Metabolic Networks., , , and . Panhellenic Conference on Informatics, volume 3746 of Lecture Notes in Computer Science, page 123-133. Springer, (2005)Fast scaffolding with small independent mixed integer programs., , , , and . Bioinform., 27 (23): 3259-3265 (2011)MOODS: fast search for position weight matrix matches in DNA sequences., , , , and . Bioinform., 25 (23): 3181-3182 (2009)Longest common substrings with k mismatches., , , and . Inf. Process. Lett., 115 (6-8): 643-647 (2015)On Approximate String Matching.. FCT, volume 158 of Lecture Notes in Computer Science, page 487-495. Springer, (1983)