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Representation and inference of cellular architecture for metabolic reconstruction and modeling.

, , and . Bioinform., 32 (7): 1074-1079 (2016)

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Querying and computing with BioCyc databases., , , , and . Bioinform., 21 (16): 3454-3455 (2005)Eco Cyc: encyclopedia of Escherichia coli genes and metabolism., , , , and . Nucleic Acids Res., 27 (1): 55-58 (1999)Prediction of Enzyme Classification from Protein Sequence without the Use of Sequence Similarity., , , , and . ISMB, page 92-99. AAAI, (1997)Pathway Tools version 23.0 update: software for pathway/genome informatics and systems biology., , , , , , , , , and 2 other author(s). Briefings Bioinform., 22 (1): 109-126 (2021)A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information, , , , , , , , and . Mol. Syst. Biol., (2007)Computing minimal nutrient sets from metabolic networks via linear constraint solving., , , , , , and . BMC Bioinform., (2013)Representation and inference of cellular architecture for metabolic reconstruction and modeling., , and . Bioinform., 32 (7): 1074-1079 (2016)Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology., , , , , , , , , and 4 other author(s). Briefings Bioinform., 11 (1): 40-79 (2010)MetaCyc: a multiorganism database of metabolic pathways and enzymes., , , , , , , , , and 3 other author(s). Nucleic Acids Res., 34 (Database-Issue): 511-516 (2006)Optimal metabolic route search based on atom mappings., , and . Bioinform., 30 (14): 2043-2050 (2014)