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BitClust: Fast Geometrical Clustering of Long Molecular Dynamics Simulations., , , , , and . J. Chem. Inf. Model., 60 (2): 444-448 (2020)Electron density deformations provide new insights into the spectral shift of rhodopsins., , , , , and . J. Comput. Chem., 34 (28): 2460-2471 (2013)BitQT: a graph-based approach to the quality threshold clustering of molecular dynamics., , , , , , and . Bioinform., 38 (1): 73-79 (2021)Multi-scale simulation reveals that an amino acid substitution increases photosensitizing reaction inputs in Rhodopsins., , , , and . J. Comput. Chem., 41 (26): 2278-2295 (2020)Structural Insights into the Inhibition Site in the Phosphorylcholine Phosphatase Enzyme of Pseudomonas aeruginosa., , , , , , , and . J. Chem. Inf. Model., 62 (12): 3067-3078 (2022)RCDPeaks: memory-efficient density peaks clustering of long molecular dynamics., , , , , and . Bioinform., 38 (7): 1863-1869 (2022)MDSCAN: RMSD-based HDBSCAN clustering of long molecular dynamics., , , , , , and . Bioinform., 38 (23): 5191-5198 (November 2022)