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Efficient and verified simulation of a path ensemble for conformational change in a united-residue model of calmodulin, , and . Proceedings of the National Academy of Sciences, 104 (46): 18043-18048 (2007)Path-sampling strategies for simulating rare events in biomolecular systems, , and . Current Opinion in Structural Biology, (2017)Simulations of the alternating access mechanism of the sodium symporter Mhp1, , , , , , and . Biophysical journal, 101 (10): 2399--2407 (2011)#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol., , , , , , , , , and 42 other author(s). Int. J. High Perform. Comput. Appl., 37 (1): 28-44 (2023)Weighted ensemble: Recent mathematical developments., , , , and . CoRR, (2022)A systems-biology approach to molecular machines: Exploration of alternative transporter mechanisms., , , , and . PLoS Comput. Biol., (2020)Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories., , , , , , and . PLoS Comput. Biol., (2016)Heterogeneous Path Ensembles for Conformational Transitions in Semiatomistic Models of Adenylate Kinase, and . Journal of Chemical Theory and Computation, 6 (11): 3527-3539 (2010)A proposal for regularly updated review/survey articles: "Perpetual Reviews"., and . CoRR, (2015)WESTPA: An Interoperable, Highly Scalable Software Package for Weighted Ensemble Simulation and Analysis, , , , , , , , , and 2 other author(s). Journal of Chemical Theory and Computation, 11 (2): 800-809 (2015)