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BioNetGen 2.2: advances in rule-based modeling., , , , , , , , , and . Bioinform., 32 (21): 3366-3368 (2016)Activated Oncogenic Pathway Modifies Iron Network in Breast Epithelial Cells: A Dynamic Modeling Perspective., , , , , , , , , and 2 other author(s). PLoS Comput. Biol., (2017)Unsupervised logic-based mechanism inference for network-driven biological processes., , , , , and . PLoS Comput. Biol., (2021)MOSBIE: a tool for comparison and analysis of rule-based biochemical models., , , , and . BMC Bioinform., (2014)Thunor: visualization and analysis of high-throughput dose-response datasets., , , , and . Nucleic Acids Res., 49 (Webserver-Issue): 633-640 (2021)Systems biology markup language (SBML) level 3 package: multistate, multicomponent and multicompartment species, version 1, release 2., , , , , , , , , and 4 other author(s). J. Integr. Bioinform., (2020)Unified tumor growth mechanisms from multimodel inference and dataset integration., , , , , and . PLoS Comput. Biol., (2023)GPU-powered model analysis with PySB/cupSODA., , , , , , , and . Bioinform., 33 (21): 3492-3494 (2017)Compartmental Rule-based Modeling of Biochemical Systems., , and . WSC, page 908-919. IEEE, (2009)Statistical Model Checking in BioLab: Applications to the Automated Analysis of T-Cell Receptor Signaling Pathway., , , , , and . CMSB, volume 5307 of Lecture Notes in Computer Science, page 231-250. Springer, (2008)