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Phylocomposer and phylodirector: analysis and visualization of transducer indel models.. Bioinform., 23 (23): 3263-3264 (2007)WTFgenes: What's The Function of these genes? Static sites for model-based gene set analysis., and . F1000Research, (2017)A probabilistic model for the evolution of RNA structure.. BMC Bioinform., (2004)JBrowse Connect: A server API to connect JBrowse instances and users., , , , and . PLoS Comput. Biol., (2020)GrainGenes: a data-rich repository for small grains genetics and genomics., , , , , , , , , and 4 other author(s). Database J. Biol. Databases Curation, (2022)HandAlign: Bayesian multiple sequence alignment, phylogeny and ancestral reconstruction., , and . Bioinform., 28 (8): 1170-1171 (2012)JBrowse Jupyter: a Python interface to JBrowse 2., , , , , , , , , and 2 other author(s). Bioinform., (January 2023)JBrowseR: an R interface to the JBrowse 2 genome browser., , , , , , , and . Bioinform., 37 (21): 3914-3915 (2021)Machine Boss: rapid prototyping of bioinformatic automata., , , , , , and . Bioinform., 37 (1): 29-35 (2021)Cram-JS: reference-based decompression in node and the browser., , , , and . Bioinform., 35 (21): 4451-4452 (2019)