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meRanTK: methylated RNA analysis ToolKit., , , , and . Bioinform., 32 (5): 782-785 (2016)iLAP: a workflow-driven software for experimental protocol development, data acquisition and analysis., , , , , , , and . BMC Bioinform., (2009)TIminer: NGS data mining pipeline for cancer immunology and immunotherapy., , , , , and . Bioinform., 33 (19): 3140-3141 (2017)ClusterControl: a web interface for distributing and monitoring bioinformatics applications on a Linux cluster., , and . Bioinform., 20 (5): 805-807 (2004)MIO: microRNA target analysis system for immuno-oncology., , , , , and . Bioinform., 38 (14): 3665-3667 (2022)nextNEOpi: a comprehensive pipeline for computational neoantigen prediction., , , , , , and . Bioinform., 38 (4): 1131-1132 (2022)Scirpy: a Scanpy extension for analyzing single-cell T-cell receptor-sequencing data., , , , , , and . Bioinform., 36 (18): 4817-4818 (2020)NeoFuse: predicting fusion neoantigens from RNA sequencing data., , , , and . Bioinform., 36 (7): 2260-2261 (2020)