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Gene tree and species tree reconciliation with endosymbiotic gene transfer.

, , , and . Bioinform., 37 (Supplement): 120-132 (2021)

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Evolution of Tandemly Arrayed Genes in Multiple Species., , and . RECOMB-CG, volume 4751 of Lecture Notes in Computer Science, page 96-109. Springer, (2007)Reconstructing the pre-doubling genome., , and . RECOMB, page 154-163. ACM, (1999)A Phylogenetic Approach to Genetic Map Refinement., , and . RECOMB-CG, volume 5267 of Lecture Notes in Computer Science, page 198-210. Springer, (2008)Advances on Genome Duplication Distances., , , and . RECOMB-CG, volume 6398 of Lecture Notes in Computer Science, page 25-38. Springer, (2010)Seed-Based Exclusion Method for Non-coding RNA Gene Search., , and . COCOON, volume 4598 of Lecture Notes in Computer Science, page 27-39. Springer, (2007)Genome Rearrangement by Reversals and Insertions/Deletions of Contiguous Segments.. CPM, volume 1848 of Lecture Notes in Computer Science, page 222-234. Springer, (2000)Genome rearrangement with gene families.. Mathematics of Evolution and Phylogeny, Oxford University Press, (2007)Evolution through segmental duplications and losses: a Super-Reconciliation approach., , , , , , and . Algorithms Mol. Biol., 15 (1): 12 (2020)Predicting the Evolution of Syntenies - An Algorithmic Review.. Algorithms, 14 (5): 152 (2021)Minimum Leaf Removal for Reconciliation: Complexity and Algorithms., and . CPM, volume 7354 of Lecture Notes in Computer Science, page 399-412. Springer, (2012)