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uPy: A Ubiquitous CG Python API with Biological-Modeling Applications., , , , and . IEEE Computer Graphics and Applications, 32 (5): 50-61 (2012)Analysis of HIV Wild-Type and Mutant Structures via in Silico Docking against Diverse Ligand Libraries., , , and . Journal of Chemical Information and Modeling, 47 (3): 1258-1262 (2007)Cyclin-dependent kinases 5 template: Useful for virtual screening., , , , and . Comput. Biol. Medicine, 42 (1): 106-111 (2012)Lattice modeling: Accuracy of energy calculations., , , and . J. Comput. Chem., 17 (8): 1025-1032 (1996)A semiempirical free energy force field with charge-based desolvation., , , and . J. Comput. Chem., 28 (6): 1145-1152 (2007)Labels on Levels: Labeling of Multi-Scale Multi-Instance and Crowded 3D Biological Environments., , , , , , , , and . IEEE Trans. Vis. Comput. Graph., 25 (1): 977-986 (2019)Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function, , , , , , and . Journal of Computational Chemistry, 19 (14): 1639--1662 (January 1999)Massive-Scale Binding Free Energy Simulations of HIV Integrase Complexes Using Asynchronous Replica Exchange Framework Implemented on the IBM WCG Distributed Network., , , , , , , and . J. Chem. Inf. Model., 59 (4): 1382-1397 (2019)Identifying Affordances of 3D Printed Tangible Models for Understanding Core Biological Concepts., , , and . ICLS, International Society of the Learning Sciences, (2014)Protein Flexibility in Virtual Screening: The BACE-1 Case Study., , , , , , , , , and . J. Chem. Inf. Model., 52 (10): 2697-2704 (2012)