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Predicting backbone Cα angles and dihedrals from protein sequences by stacked sparse auto-encoder deep neural network.

J. Lyons, A. Dehzangi, R. Heffernan, A. Sharma, K. Paliwal, A. Sattar, Y. Zhou, и Y. Yang. J. Comput. Chem., 35 (28): 2040-2046 (2014)

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Yang Yang

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Sequence-Based Prediction of Protein-Carbohydrate Binding Sites Using Support Vector Machines.G. Taherzadeh, Y. Zhou, A. Liew, и Y. Yang. Journal of Chemical Information and Modeling, 56 (10): 2123 (2016)Predicting the errors of predicted local backbone angles and non-local solvent- accessibilities of proteins by deep neural networks.J. Gao, Y. Yang, и Y. Zhou. Bioinform., 32 (24): 3768-3773 (2016)Single-sequence-based prediction of protein secondary structures and solvent accessibility by deep whole-sequence learning.R. Heffernan, K. Paliwal, J. Lyons, J. Singh, Y. Yang, и Y. Zhou. J. Comput. Chem., 39 (26): 2210-2216 (2018)B-factor profile prediction for RNA flexibility using support vector machines.I. Guruge, G. Taherzadeh, J. Zhan, Y. Zhou, и Y. Yang. J. Comput. Chem., 39 (8): 407-411 (2018)Subgraph extraction and graph representation learning for single cell Hi-C imputation and clustering.J. Zheng, Y. Yang, и Z. Dai. Briefings Bioinform., (ноября 2023)EVlncRNA-Dpred: improved prediction of experimentally validated lncRNAs by deep learning.B. Zhou, M. Ding, J. Feng, B. Ji, P. Huang, J. Zhang, X. Yu, Z. Cao, Y. Yang, Y. Zhou и 1 other автор(ы). Briefings Bioinform., (января 2023)A parameter-free deep embedded clustering method for single-cell RNA-seq data.Y. Zeng, Z. Wei, F. Zhong, Z. Pan, Y. Lu, и Y. Yang. Briefings Bioinform., (2022)Spatial transcriptomics prediction from histology jointly through Transformer and graph neural networks.Y. Zeng, Z. Wei, W. Yu, R. Yin, Y. Yuan, B. Li, Z. Tang, Y. Lu, и Y. Yang. Briefings Bioinform., (2022)SUGAR: Efficient Subgraph-Level Training via Resource-Aware Graph Partitioning.Z. Xue, Y. Yang, и R. Marculescu. IEEE Trans. Computers, 72 (11): 3167-3177 (ноября 2023)Fast and accurate non-sequential protein structure alignment using a new asymmetric linear sum assignment heuristic.P. Brown, W. Pullan, Y. Yang, и Y. Zhou. Bioinform., 32 (3): 370-377 (2016)

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Yang Yang

Yang Yang

Yang Yang

Yang Yang

Yang Yang

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