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Integrating Structure and Sequence: Protein Graph Embeddings via GNNs and LLMs.

, , , and . ICPRAM, page 582-593. SCITEPRESS, (2024)

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Formal Analysis of the Genetic Toggle., and . CMSB, volume 5688 of Lecture Notes in Computer Science, page 96-110. Springer, (2009)NuChart-II: A Graph-Based Approach for Analysis and Interpretation of Hi-C Data., , , , , and . CIBB, volume 8623 of Lecture Notes in Computer Science, page 298-311. Springer, (2014)Muxstep: an open-source C ++ multiplex HMM library for making inferences on multiple data types., and . Bioinform., 32 (16): 2562-2564 (2016)Probabilistic Dual Network Architecture Search on Graphs., , , , , and . CoRR, (2020)ChronoMID - Cross-Modal Neural Networks for 3-D Temporal Medical Imaging Data., , , and . CoRR, (2019)An integrated modelling approach for R5-X4 mutation and HAART therapy assessment., , and . Swarm Intelligence, 4 (4): 319-340 (2010)Molecular multiplex network inference using Gaussian mixture hidden Markov models., and . J. Complex Networks, 4 (4): 561-574 (2016)Graph Attention Networks, , , , , and . Proceedings of the 6th International Conference on Learning Representations, page 1--12. (2018)Advances in Artificial Life: Synthesis and Simulation of Living Systems: Editorial., , , , and . Artif. Life, 21 (4): 395-397 (2015)A Multi-modal Convolutional Neural Network Framework for the Prediction of Alzheimer's Disease., , , , and . EMBC, page 1271-1274. IEEE, (2018)