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A novel method for multiple alignment of sequences with repeated and shuffled elements

, , , and . Genome Res, 14 (11): 2336--46 (November 2004)
DOI: 10.1101/gr.2657504

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A novel method for multiple alignment of sequences with repeated and shuffled elements, , , and . Genome Res, 14 (11): 2336--46 (November 2004)Modeling cell heterogeneity: from single-cell variations to mixed cells populations., , , , and . Pacific Symposium on Biocomputing, page 445-450. World Scientific Publishing, (2013)Identification of hierarchical chromatin domains., and . Bioinform., 32 (11): 1601-1609 (2016)De Novo Discovery of Mutated Driver Pathways in Cancer., , and . RECOMB, volume 6577 of Lecture Notes in Computer Science, page 499-500. Springer, (2011)Finding Driver Pathways in Cancer: Models and Algorithms., , and . WABI, volume 6833 of Lecture Notes in Computer Science, page 314-325. Springer, (2011)Algorithms and Genome Sequencing: Identifying Driver Pathways in Cancer, , and . Computer, (2012)Analysis of segmental duplications via duplication distance., and . ECCB, page 133-138. (2008)Reconstructing Mutational History in Multiply Sampled Tumors Using Perfect Phylogeny Mixtures., and . WABI, volume 8701 of Lecture Notes in Computer Science, page 354-367. Springer, (2014)Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype Data., and . RECOMB, volume 5541 of Lecture Notes in Computer Science, page 418-433. Springer, (2009)Inferring Intra-tumor Heterogeneity from High-Throughput DNA Sequencing Data., , and . RECOMB, volume 7821 of Lecture Notes in Computer Science, page 171-172. Springer, (2013)