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Alchemical Binding Free Energy Calculations in AMBER20: Advances and Best Practices for Drug Discovery.

, , , , , , , , , , , , , and . J. Chem. Inf. Model., 60 (11): 5595-5623 (2020)

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Extension of adaptive tree code and fast multipole methods to high angular momentum particle charge densities., and . J. Comput. Chem., 29 (12): 1895-1904 (2008)Nucleic acid reactivity: Challenges for next-generation semiempirical quantum models., , and . J. Comput. Chem., 36 (18): 1370-1389 (2015)GPU-Accelerated Molecular Dynamics and Free Energy Methods in Amber18: Performance Enhancements and New Features., , , , , , , , , and . J. Chem. Inf. Model., 58 (10): 2043-2050 (2018)Alchemical Binding Free Energy Calculations in AMBER20: Advances and Best Practices for Drug Discovery., , , , , , , , , and 4 other author(s). J. Chem. Inf. Model., 60 (11): 5595-5623 (2020)AmberTools., , , , , , , , , and 37 other author(s). J. Chem. Inf. Model., 63 (20): 6183-6191 (October 2023)CHARMM-GUI Free Energy Calculator for Practical Ligand Binding Free Energy Simulations with AMBER., , , , , , and . J. Chem. Inf. Model., 61 (9): 4145-4151 (2021)AMBER Drug Discovery Boost Tools: Automated Workflow for Production Free-Energy Simulation Setup and Analysis (ProFESSA)., , , , , and . J. Chem. Inf. Model., 62 (23): 6069-6083 (2022)