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Learning Advanced TFBS Models from Chip-Seq Data - diChIPMunk: Effective Construction of Dinucleotide Positional Weight Matrices.

, , , , and . BIOINFORMATICS, page 146-150. SciTePress, (2013)

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HOCOMOCO: a comprehensive collection of human transcription factor binding sites models., , , , , , and . Nucleic Acids Res., 41 (Database-Issue): 195-202 (2013)ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs., , , , , , , , , and 3 other author(s). Nucleic Acids Res., 50 (W1): 51-56 (2022)Jaccard index based similarity measure to compare transcription factor binding site models., , and . Algorithms Mol. Biol., (2013)HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models., , , , , , , , , and 1 other author(s). Nucleic Acids Res., 44 (Database-Issue): 116-125 (2016)HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis., , , , , , , , , and 2 other author(s). Nucleic Acids Res., 46 (Database-Issue): D252-D259 (2018)Learning Advanced TFBS Models from Chip-Seq Data - diChIPMunk: Effective Construction of Dinucleotide Positional Weight Matrices., , , , and . BIOINFORMATICS, page 146-150. SciTePress, (2013)From binding motifs in Chip-seq Data to Improved Models of transcription factor binding Sites., , , , , and . J. Bioinform. Comput. Biol., (2013)PERFECTOS-APE - Predicting Regulatory Functional Effect of SNPs by Approximate P-value Estimation., , , , and . BIOINFORMATICS, page 102-108. SciTePress, (2015)EpiFactors: a comprehensive database of human epigenetic factors and complexes., , , , , , , , and . Database J. Biol. Databases Curation, (2015)EpiFactors 2022: expansion and enhancement of a curated database of human epigenetic factors and complexes., , , , , and . Nucleic Acids Res., 51 (D1): 564-570 (January 2023)