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Balancing efficient analysis and storage of quantitative genomics data with the D4 format and d4tools., , and . Nat. Comput. Sci., 1 (6): 441-447 (2021)Overlooked roles of DNA damage and maternal age in generating human germline mutations, , , , , , , and . Proceedings of the National Academy of Sciences, 116 (19): 9491--9500 (2019)Poretools: a toolkit for analyzing nanopore sequence data., and . Bioinform., 30 (23): 3399-3401 (2014)Annotation of structural variants with reported allele frequencies and related metrics from multiple datasets using SVAFotate., , and . BMC Bioinform., 23 (1): 490 (2022)XPRESSyourself: Enhancing, standardizing, and automating ribosome profiling computational analyses yields improved insight into data., , , , , , , and . PLoS Comput. Biol., (2020)Population-based structural variation discovery with Hydra-Multi., , and . Bioinform., 31 (8): 1286-1289 (2015)BEDTools: a flexible suite of utilities for comparing genomic features., and . Bioinform., 26 (6): 841-842 (2010)hts-nim: scripting high-performance genomic analyses., and . Bioinform., 34 (19): 3387-3389 (2018)Binary Interval Search: a scalable algorithm for counting interval intersections., , , , and . Bioinform., 29 (1): 1-7 (2013)BamTools: a C++ API and toolkit for analyzing and managing BAM files., , , , and . Bioinform., 27 (12): 1691-1692 (2011)