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Fast and scalable genome-wide inference of local tree topologies from large number of haplotypes based on tree consistent PBWT data structure

, , and . bioRxiv, (2019)
DOI: 10.1101/542035

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Population genomics of domestic and wild yeasts., , , , , , , , , and 16 other author(s). Nature, 458 (7236): 337--341 (Mar 19, 2009)Fast and scalable genome-wide inference of local tree topologies from large number of haplotypes based on tree consistent PBWT data structure, , and . bioRxiv, (2019)Copy number variant detection in inbred strains from short read sequence data., , , and . Bioinform., 26 (4): 565-567 (2010)Comparative ab initio prediction of gene structures using pair HMMs., and . Bioinform., 18 (10): 1309-1318 (2002)Product Units with Trainable Exponents and Multi-Layer Networks., and . NATO Neurocomputing, volume 68 of NATO ASI Series, page 15-26. Springer, (1989)Pfam: multiple sequence alignments and HMM-profiles of protein domains., , , , and . Nucleic Acids Res., 26 (1): 320-322 (1998)The Pfam protein families database., , , , , , , , , and 3 other author(s). Nucleic Acids Res., 32 (Database-Issue): 138-141 (2004)Ensembl 2006., , , , , , , , , and 41 other author(s). Nucleic Acids Res., 34 (Database-Issue): 556-561 (2006)WormBase: a comprehensive data resource for Caenorhabditis biology and genomics., , , , , , , , , and 21 other author(s). Nucleic Acids Res., 33 (Database-Issue): 383-389 (2005)WormBase: better software, richer content, , , , , , , , , and 20 other author(s). Nucl. Acids Res., 34 (suppl\_1): D475--478 (2006)