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The BioMart community portal: an innovative alternative to large, centralized data repositories.

D. Smedley, S. Haider, S. Durinck, L. Pandini, P. Provero, J. Allen, O. Arnaiz, M. Awedh, R. Baldock, G. Barbiera, P. Bardou, T. Beck, A. Blake, M. Bonierbale, A. Brookes, G. Bucci, I. Buetti, S. Burge, C. Cabau, J. Carlson, C. Chelala, C. Chrysostomou, D. Cittaro, O. Collin, R. Cordova, R. Cutts, E. Dassi, A. Génova, A. Djari, A. Esposito, H. Estrella, E. Eyras, J. Fernandez-Banet, S. Forbes, R. Free, T. Fujisawa, E. Gadaleta, J. Garcia-Manteiga, D. Goodstein, K. Gray, J. Guerra-Assunção, B. Haggarty, D. Han, B. Han, T. Harris, J. Harshbarger, R. Hastings, R. Hayes, C. Hoede, S. Hu, Z. Hu, L. Hutchins, Z. Kan, H. Kawaji, A. Keliet, A. Kerhornou, S. Kim, R. Kinsella, C. Klopp, L. Kong, D. Lawson, D. Lazarevic, J. Lee, T. Letellier, C. Li, P. Liò, C. Liu, J. Luo, A. Maass, J. Mariette, T. Maurel, S. Merella, A. Mohamed, F. Moreews, N. Ibouniyamine, N. Ndegwa, C. Noirot, C. Perez-Llamas, M. Primig, A. Quattrone, H. Quesneville, D. Rambaldi, J. Reecy, M. Riba, S. Rosanoff, A. Saddiq, E. Salas, O. Sallou, R. Shepherd, R. Simon, L. Sperling, W. Spooner, D. Staines, D. Steinbach, K. Stone, E. Stupka, J. Teague, A. Ullah, J. Wang, D. Ware, M. Wong-Erasmus, K. Youens-Clark, A. Zadissa, S. Zhang, и A. Kasprzyk. Nucleic Acids Res., 43 (Webserver-Issue): W589-W598 (2015)

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Krystyna Warecka

Kai Warendorf

Klaus Warendorf

Aleksandra Warecka

Nadine Daria Wares

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Applications and methods utilizing the Simple Semantic Web Architecture and Protocol (SSWAP) for bioinformatics resource discovery and disparate data and service integration.R. Nelson, S. Avraham, R. Shoemaker, G. May, D. Ware, и D. Gessler. BioData Min., (2010)Panzea: an update on new content and features.P. Canaran, E. Buckler, J. Glaubitz, L. Stein, Q. Sun, W. Zhao, и D. Ware. Nucleic Acids Res., 36 (Database-Issue): 1041-1043 (2008)Gramene: a growing plant comparative genomics resource.C. Liang, P. Jaiswal, C. Hebbard, S. Avraham, E. Buckler, T. Casstevens, B. Hurwitz, S. McCouch, J. Ni, A. Pujar и 11 other автор(ы). Nucleic Acids Res., 36 (Database-Issue): 947-953 (2008)AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.L. Harper, J. Campbell, E. Cannon, S. Jung, M. Poelchau, R. Walls, C. Andorf, E. Arnaud, T. Berardini, C. Birkett и 42 other автор(ы). Database J. Biol. Databases Curation, (2018)Ensembl Genomes 2022: an expanding genome resource for non-vertebrates.A. Yates, J. Allen, M. Amode, A. Azov, M. Barba, A. Becerra, J. Bhai, L. Campbell, M. Martinez, M. Chakiachvili и 55 other автор(ы). Nucleic Acids Res., 50 (D1): 996-1003 (2022)Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species.P. Kersey, J. Allen, A. Allot, M. Barba, S. Boddu, B. Bolt, D. Carvalho-Silva, M. Christensen, P. Davis, C. Grabmueller и 36 other автор(ы). Nucleic Acids Res., 46 (Database-Issue): D802-D808 (2018)Ranked choice voting for representative transcripts with TRaCE.A. Olson, и D. Ware. Bioinform., 38 (1): 261-264 (2021)Ensembl Genomes 2020 - enabling non-vertebrate genomic research.K. Howe, B. Contreras-Moreira, N. Silva, G. Maslen, W. Akanni, J. Allen, J. Álvarez-Jarreta, M. Barba, D. Bolser, L. Cambell и 45 other автор(ы). Nucleic Acids Res., 48 (Database-Issue): D689-D695 (2020)High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource.S. Seaver, S. Gerdes, O. Frelin, C. Lerma-Ortiz, L. Bradbury, R. Zallot, G. Hasnain, T. Niehaus, B. El Yacoubi, S. Pasternak и 8 other автор(ы). Proceedings of the National Academy of Sciences of the United States of America, (09.06.2014)SciApps: a Bioinformatics Workflow Platform Powered by XSEDE and CyVerse.L. Wang, Z. Lu, P. Buren, и D. Ware. PEARC, стр. 48:1-48:5. ACM, (2018)

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