Stan modeling language and C++ library for Bayesian inference. NUTS adaptive HMC (MCMC) sampling, automatic differentiation, R, shell interfaces. Gelman.
MALLET is a Java-based package for statistical natural language processing, document classification, clustering, topic modeling, information extraction, and other machine learning applications to text.
A. Hendrickson, J. Wang, and M. Atzmueller. Proc. 24th International Symposium on Methodologies for Intelligent Systems (ISMIS), Heidelberg, Germany, Springer Verlag, ((accepted) 2018)
C. Kling, J. Kunegis, S. Sizov, and S. Staab. Proceedings of the 7th ACM international conference on Web search and data mining, page 603--612. ACM, (2014)
D. Ramage, D. Hall, R. Nallapati, and C. Manning. Proceedings of the 2009 Conference on Empirical Methods in Natural Language Processing: Volume 1 - Volume 1, page 248--256. Stroudsburg, PA, USA, Association for Computational Linguistics, (2009)
X. Liu, and W. Croft. Proceedings of the 27th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, page 186--193. New York, NY, USA, ACM, (2004)