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Sympatric ecological speciation meets pyrosequencing: sampling the transcriptome of the apple maggot Rhagoletis pomonella
Schwarz, H M Robertson, J L Feder, K Varala, M E Hudson, G J Ragland, D A Hahn, and S H Berlocher BMC Genomics 10(1):633-633 (December 2009)
to 454 transcriptome by derele on Dec 30, 2009, 2:13 PM
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Next generation transcriptomes for next generation genomes using est2assembly
Papanicolaou, R Stierli, R H Ffrench-Constant, and D G Heckel BMC Bioinformatics 10(1):447-447 (December 2009)
to 454 transcriptome by derele on Dec 30, 2009, 2:12 PM
URL | DOI | BibTeX (0)
MBEToolbox: a MATLAB toolbox for sequence data analysis in molecular biology and evolution
J.J. Cai, D.K. Smith, X. Xia, and K.Y. Yuen BMC bioinformatics (2005)
to 454 imported software transcriptome by derele and 1 other user on Dec 10, 2009, 4:17 PM
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Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis
M. Ayele, B.J. Haas, N. Kumar, H. Wu, Y. Xiao, S. Van Aken, T.R. Utterback, J.R. Wortman, O.R. White, and C.D. Town Genome research 15(4):487--95 (2005)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Genomic profiling. Interplay between clinical epidemiology, bioinformatics and biostatistics
U. Mansmann Methods of information in medicine 44(3):454--60 (2005)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Isolation and characterization of a protochordate histocompatibility locus
A.W. De Tomaso, S.V. Nyholm, K.J. Palmeri, K.J. Ishizuka, W.B. Ludington, K. Mitchel, and I.L. Weissman Nature 438(7067):454--9 (2005)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Multiplex sequencing of paired-end ditags MS-PET: a strategy for the ultra-high-throughput analysis of transcriptomes and genomes
P. Ng, J.J. Tan, H.S. Ooi, Y.L. Lee, K.P. Chiu, M.J. Fullwood, K.G. Srinivasan, C. Perbost, L. Du, W.K. Sung, C.L. Wei, and Y. Ruan Nucleic acids research 34(12):e84 (2006)
to 454 imported transcriptome by derele and 1 other user on Dec 10, 2009, 4:17 PM
DOI | BibTeX (0)
Gene discovery and annotation using LCM-454 transcriptome sequencing
S.J. Emrich, W.B. Barbazuk, L. Li, and P.S. Schnable Genome research 17(1):69--73 (2007)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Cell type-specific gene expression profiling in plants by using a combination of laser microdissection and high-throughput technologies
K. Ohtsu, H. Takahashi, P.S. Schnable, and M. Nakazono Plant & cell physiology 48(1):3--7 (2007)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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SNP discovery via 454 transcriptome sequencing
W.B. Barbazuk, S.J. Emrich, H.D. Chen, L. Li, and P.S. Schnable The Plant journal : for cell and molecular biology 51(5):910--8 (2007)
to 454 imported transcriptome by derele and 1 other user on Dec 10, 2009, 4:17 PM
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Transcript profiling by 3'-untranslated region sequencing resolves expression of gene families
A.L. Eveland, D.R. McCarty, and K.E. Koch Plant physiology 146(1):32--44 (2008)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
DOI | BibTeX (0)
Variable sexually dimorphic gene expression in laboratory strains of Drosophila melanogaster
D.A. Baker, L.A. Meadows, J. Wang, J.A. Dow, and S. Russell BMC genomics (2007)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Developmental expression patterns of the zebrafish small heat shock proteins
M. Marvin, D. O'Rourke, T. Kurihara, C.E. Juliano, K.L. Harrison, and L.D. Hutson Developmental dynamics : an official publication of the American Association of Anatomists 237(2):454--63 (2008)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing
J.C. Vera, C.W. Wheat, H.W. Fescemyer, M.J. Frilander, D.L. Crawford, I. Hanski, and J.H. Marden Molecular ecology 17(7):1636--47 (2008)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Herbivory-induced changes in the small-RNA transcriptome and phytohormone signaling in Nicotiana attenuata
S.P. Pandey, P. Shahi, K. Gase, and I.T. Baldwin Proceedings of the National Academy of Sciences of the United States of America 105(12):4559--64 (2008)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Dissecting direct reprogramming through integrative genomic analysis
T.S. Mikkelsen, J. Hanna, X. Zhang, M. Ku, M. Wernig, P. Schorderet, B.E. Bernstein, R. Jaenisch, E.S. Lander, and A. Meissner Nature 454(7200):49--55 (2008)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
E. Novaes, D.R. Drost, W.G. Farmerie, G.J. Pappas, D. Grattapaglia, R.R. Sederoff, and M. Kirst BMC genomics (2008)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Applications of next-generation sequencing technologies in functional genomics
O. Morozova, and M.A. Marra Genomics 92(5):255--64 (2008)
to 454 imported transcriptome by derele and 1 other user on Dec 10, 2009, 4:17 PM
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Genetics: The production line
A. Petherick Nature 454(7208):1042--5 (2008)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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Noncoding RNA in development
P.P. Amaral, and J.S. Mattick Mammalian genome : official journal of the International Mammalian Genome Society (2008)
to 454 imported transcriptome by derele on Dec 10, 2009, 4:17 PM
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