Accessing and analyzing the exponentially expanding genomic sequence and functional data pose a challenge for biomedical researchers. Here we describe an interactive system, Galaxy, that combines the power of existing genome annotation databases with a simple Web portal to enable users to search remote resources, combine data from independent queries, and visualize the results. The heart of Galaxy is a flexible history system that stores the queries from each user; performs operations such as intersections, unions, and subtractions; and links to other computational tools. Galaxy can be accessed at http://g2.bx.psu.edu.
%0 Journal Article
%1 Giardine:2005:Genome-Res:16169926
%A Giardine, B
%A Riemer, C
%A Hardison, R C
%A Burhans, R
%A Elnitski, L
%A Shah, P
%A Zhang, Y
%A Blankenberg, D
%A Albert, I
%A Taylor, J
%A Miller, W
%A Kent, W J
%A Nekrutenko, A
%D 2005
%J Genome Res
%K galaxy imported proj:0915 software
%N 10
%P 1451-1455
%R 10.1101/gr.4086505
%T Galaxy: a platform for interactive large-scale genome analysis
%U http://www.hubmed.org/display.cgi?uids=16169926
%V 15
%X Accessing and analyzing the exponentially expanding genomic sequence and functional data pose a challenge for biomedical researchers. Here we describe an interactive system, Galaxy, that combines the power of existing genome annotation databases with a simple Web portal to enable users to search remote resources, combine data from independent queries, and visualize the results. The heart of Galaxy is a flexible history system that stores the queries from each user; performs operations such as intersections, unions, and subtractions; and links to other computational tools. Galaxy can be accessed at http://g2.bx.psu.edu.
@article{Giardine:2005:Genome-Res:16169926,
abstract = {Accessing and analyzing the exponentially expanding genomic sequence and functional data pose a challenge for biomedical researchers. Here we describe an interactive system, Galaxy, that combines the power of existing genome annotation databases with a simple Web portal to enable users to search remote resources, combine data from independent queries, and visualize the results. The heart of Galaxy is a flexible history system that stores the queries from each user; performs operations such as intersections, unions, and subtractions; and links to other computational tools. Galaxy can be accessed at http://g2.bx.psu.edu.},
added-at = {2009-11-05T11:35:34.000+0100},
author = {Giardine, B and Riemer, C and Hardison, R C and Burhans, R and Elnitski, L and Shah, P and Zhang, Y and Blankenberg, D and Albert, I and Taylor, J and Miller, W and Kent, W J and Nekrutenko, A},
biburl = {https://www.bibsonomy.org/bibtex/2892df99676817c3d128a989c72b2df0e/wnpxrz},
doi = {10.1101/gr.4086505},
interhash = {3d27f22361571f031e4246a429918cb3},
intrahash = {892df99676817c3d128a989c72b2df0e},
journal = {Genome Res},
keywords = {galaxy imported proj:0915 software},
month = Oct,
number = 10,
pages = {1451-1455},
pmid = {16169926},
timestamp = {2009-11-05T11:35:34.000+0100},
title = {Galaxy: a platform for interactive large-scale genome analysis},
url = {http://www.hubmed.org/display.cgi?uids=16169926},
volume = 15,
year = 2005
}