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Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm.

, , , , , , , , and . Nucleic Acids Res., 34 (Web-Server-Issue): 541-545 (2006)

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TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes., , , , , , , , , and 6 other author(s). Nucleic Acids Res., 34 (Database-Issue): 108-110 (2006)Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer., , , , , , , , , and 7 other author(s). BMC Bioinform., 20-S (4): 119:1-119:20 (2019)geneXplainR: An R interface for the geneXplain platform., , and . J. Open Source Softw., 2 (18): 412 (2017)Molecular mechanistic associations of human diseases., , , , and . BMC Syst. Biol., (2010)3DTF: a web server for predicting transcription factor PWMs using 3D structure-based energy calculations., , , and . Nucleic Acids Res., 40 (Web-Server-Issue): 180-185 (2012)Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm., , , , , , , , and . Nucleic Acids Res., 34 (Web-Server-Issue): 541-545 (2006)A Discriminative Approach for Unsupervised Clustering of DNA Sequence Motifs., , , and . PLoS Comput. Biol., (2013)Creating PWMs of transcription factors using 3D structure-based computation of protein-DNA free binding energies., , and . BMC Bioinform., (2010)Explaining decisions of Graph Convolutional Neural Networks: patient-specific molecular subnetworks responsible for metastasis prediction in breast cancer, , , , , , , , and . BioRxiv, (2020)