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The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease., , , , , , , , , and 22 other author(s). Nucleic Acids Res., 47 (Database-Issue): D614-D624 (2019)A Systems Biology Approach to Drug Targets in Pseudomonas aeruginosa Biofilm, , , and . PLoS ONE, 7 (4): e34337+ (Apr 16, 2012)Systematic prediction of health-relevant human-microbial co-metabolism through a computational framework, and . Gut Microbes, 6 (2): 120--130 (Mar 4, 2015)Recon3D enables a three-dimensional view of gene variation in human metabolism, , , , , , , , , and 11 other author(s). Nature Biotechnology, (February 2018)Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0, , , , , , , , , and 45 other author(s). Nature Protocols, 14 (3): 639--702 (2019)Systems biology of host-microbe metabolomics., and . Wiley interdisciplinary reviews. Systems biology and medicine, (Apr 30, 2015)Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota., , , , , , , , , and 2 other author(s). Nature biotechnology, 35 (1): 81--89 (January 2017)DEMETER: efficient simultaneous curation of genome-scale reconstructions guided by experimental data and refined gene annotations., , , and . Bioinform., 37 (21): 3974-3975 (2021)The Microbiome Modeling Toolbox: from microbial interactions to personalized microbial communities., , , , , and . Bioinform., 35 (13): 2332-2334 (2019)Gut microbiota functions: metabolism of nutrients and other food components., , , , , , and . European journal of nutrition, (Apr 9, 2017)