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SynLinker: an integrated system for designing linkers and synthetic fusion proteins., , and . Bioinform., 31 (22): 3700-3702 (2015)Software applications for flux balance analysis., , , and . Briefings Bioinform., 15 (1): 108-122 (2014)Cofactor Modification Analysis: a Computational Framework to Identify cofactor specificity Engineering targets for strain Improvement., , , , and . J. Bioinform. Comput. Biol., (2013)Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network., and . BMC Syst. Biol., (2009)WEbcoli: an interactive and asynchronous web application for in silico design and analysis of genome-scale E.coli model., , , , and . Bioinform., 25 (21): 2850-2852 (2009)Metabolite essentiality elucidates robustness of Escherichia coli metabolism, , , , , , and . Proceedings of the National Academy of Sciences, 104 (34): 13638--13642 (Aug 21, 2007)Web-based applications for building, managing and analysing kinetic models of biological systems., , , , and . Briefings Bioinform., 10 (1): 65-74 (2009)Mathematical modeling and sensitivity analysis of the integrated TNFα-mediated apoptotic pathway for identifying key regulators., and . Comput. Biol. Medicine, 41 (7): 512-528 (2011)BioSilico: an integrated metabolic database system., , , , , , , , and . Bioinform., 20 (17): 3270-3272 (2004)MFAML: a standard data structure for representing and exchanging metabolic flux models., , , , and . Bioinform., 21 (15): 3329-3330 (2005)