tag :: python software

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1Kerko
Bibliography frontend for Zotero bibs. Python, Flask.
4 months ago by @filologanoga
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1POSS-UniMe/simple-physics-with-Python
https://github.com/POSS-UniMe/simple-physics-with-Python/tree/main
11 months ago by @johb
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jupyter
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2Home page for the PyPDF2 project
http://mstamy2.github.io/PyPDF2/
3 years ago by @ubt.rohlfs
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1pymethylprocess · PyPI
Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.
4 years ago by @marcsaric
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cancer-research
methylation
python
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1openvax/varcode: Library for manipulating genomic variants and predicting their effects
Library for manipulating genomic variants and predicting their effects - openvax/varcode
4 years ago by @marcsaric
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variant-annotation
pythonsoftwarevariant-annotation
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1ABlog for Sphinx — ABlog
ABlog is a Sphinx extension that converts any documentation or personal website project into a full-fledged blog with:
4 years ago by @mjbrown
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documenting
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blogdocumentingpythonsoftwarestatictoolsweb
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1Python - Journal of Open Source Software
https://joss.theoj.org/papers/in/Python
4 years ago by @analyst
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collectionjournalopensourcepaperprogrammingpythonsoftware
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3awesome-python: A curated list of awesome Python frameworks, libraries, software and resources
A curated list of awesome Python frameworks, libraries, software and resources - vinta/awesome-python
5 years ago by @mjbrown
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frameworks
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2Python For Beginners | Python.org
The official home of the Python Programming Language
5 years ago by @osso73
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1The PySD Cookbook — PySD-Cookbook 0.1.0 documentation
https://pysd-cookbook.readthedocs.io/en/latest/
5 years ago by @schmidt2
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1Maschinelles Lernen
J. Frochte. Hanser, München, 2 edition, (2019)
5 years ago by @flint63
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02041
105
8book
ai
analysis
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learn
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-shelf020411058bookaianalysisdatadevelopmentlearnnumericalpatternpythonrecognitionsoftware
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2Pybel: a Python wrapper for the OpenBabel cheminformatics toolkit
N. O'Boyle, C. Morley, and G. Hutchison. Chemistry Central Journal, 2 (1): 5+ (2008)
5 years ago by @fairybasslet
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cheminformatics
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openbabel
pybel
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cheminformaticsopen-sourceopenbabelpybelpythonsoftwaretoolkit
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3PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
B. Georgi, I. Costa, and A. Schliep. BMC Bioinformatics, 11 (1): 9+ (Jan 6, 2010)
5 years ago by @karthikraman
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clustering
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clusteringpythonsoftware
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1MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics
J. Egea, D. Henriques, T. Cokelaer, A. Villaverde, A. MacNamara, D. Danciu, J. Banga, and J. Rodriguez. BMC Bioinformatics, 15 (1): 136+ (May 10, 2014)
5 years ago by @karthikraman
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matlab
parameter-estimation
python
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matlabparameter-estimationpythonsoftwaresystems-biologytoolbox
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3IPython: A System for Interactive Scientific Computing
F. Perez, and B. Granger. Computing in Science & Engineering, 9 (3): 21--29 (May 1, 2007)
5 years ago by @karthikraman
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1The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism.
G. Birkel, A. Ghosh, V. Kumar, D. Weaver, D. Ando, T. Backman, A. Arkin, J. Keasling, and H. Mart\'ın. BMC bioinformatics, (Apr 5, 2017)
5 years ago by @karthikraman
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c13
flux-analysis
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2GPU-powered model analysis with PySB/cupSODA.
L. Harris, M. Nobile, J. Pino, A. Lubbock, D. Besozzi, G. Mauri, P. Cazzaniga, and C. Lopez. Bioinformatics (Oxford, England), (Jun 28, 2017)
5 years ago by @karthikraman
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2Python data science handbook : essential tools for working with data
J. VanderPlas. O'Reilly Media, Inc, Sebastopol, CA, (2016)
6 years ago by @achakraborty
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2016bookmachine-learningoreillypythonsoftware
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2Python data science handbook : essential tools for working with data
J. VanderPlas. O'Reilly Media, Inc, Sebastopol, CA, (2016)
6 years ago by @marcsaric
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python
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pythonsoftwarestatisticstextbook
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1Scikit-learn: Machine learning in Python
F. Pedregosa, G. Varoquaux, A. Gramfort, V. Michel, B. Thirion, O. Grisel, M. Blondel, P. Prettenhofer, R. Weiss, and V. Dubourg. Journal of Machine Learning Research, 12 (Oct): 2825--2830 (2011)
6 years ago by @lautenschlager
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lursurvey
machine-learning
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2COSMOS: Python library for massively parallel workflows
E. Gafni, L. Luquette, A. Lancaster, J. Hawkins, J. Jung, Y. Souilmi, D. Wall, and P. Tonellato. Bioinformatics, 30 (20): 2956-2958 (October 2014)
7 years ago by @marcsaric
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cloud-computing
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cloud-computingfulltextpythonsequencingsoftwareworkflow
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1Jython Essentials
S. Pedroni, and N. Rappin. O'Reilly, Beijing, (2002)
7 years ago by @flint63
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01841
101
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shelf
safari
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development
script
java
python
01841101bookshelfsafarisoftwaredevelopmentscriptjavapython
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6xUnit Test Patterns: Refactoring Test Code
G. Meszaros. Addison-Wesley Signature Series Addison-Wesley, Upper Saddle River, NJ, (2007)
7 years ago by @flint63
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01841
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java
junit
perl
php
python
ruby
01841105bookshelfsafarisoftwaredevelopmentdesignpatterntestjavajunitperlphppythonruby
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6Programming the Semantic Web
T. Segaran, C. Evans, and J. Taylor. O'Reilly, Beijing, (2009)
7 years ago by @flint63
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01841
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zzz.sw
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2Learning Python
M. Lutz. O'Reilly, Beijing, 5 edition, (2013)
7 years ago by @flint63
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01841
103
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intro
01841103booksafarisoftwaredevelopmentpythonintro
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5Data Science from Scratch: First Principles with Python
J. Grus. O'Reilly, Beijing, (2015)
7 years ago by @flint63
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01624
103
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ai
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analysis
python
01624103safaribookaisoftwaredevelopmentdatapatternrecognitionanalysispython
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4Kollektive Intelligenz analysieren, programmieren und nutzen
T. Segaran. O'Reilly, Beijing, (2008)
7 years ago by @flint63
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01841
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adaptive
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application
social
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data
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01841103booksafaridevelopmentaiadaptivewebapplicationsocialsoftwareknowledgemanagementuserdatapatternrecognitionpython
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14Programming Collective Intelligence: Building Smart Web 2.0 Applications
T. Segaran. O'Reilly, Beijing, (2007)
7 years ago by @flint63
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01841
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assist
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zzz.big
01841105bookshelfsafaridevelopmentaiadaptivewebapplicationassistsocialsoftwareknowledgemanagementuserdatapatternrecognitionpythonzzz.big
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1The Python Language Reference Manual
G. van Rossum, and F. Drake. Network Theory Ltd., (2011)
7 years ago by @salotz
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programming
programming-language
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programmingprogramming-languagepythonsoftware
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2Scikit-learn: Machine learning in Python
F. Pedregosa, G. Varoquaux, A. Gramfort, V. Michel, B. Thirion, O. Grisel, M. Blondel, P. Prettenhofer, R. Weiss, V. Dubourg and 1 other author(s). Journal of Machine Learning Research, 12 (Oct): 2825--2830 (2011)
7 years ago by @salotz
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machine-learning
python
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machine-learningpythonsoftware
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BibSonomy

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1Kerko

1POSS-UniMe/simple-physics-with-Python

2Home page for the PyPDF2 project

1pymethylprocess · PyPI

1openvax/varcode: Library for manipulating genomic variants and predicting their effects

1ABlog for Sphinx — ABlog

1Python - Journal of Open Source Software

3awesome-python: A curated list of awesome Python frameworks, libraries, software and resources

2Python For Beginners | Python.org

1The PySD Cookbook — PySD-Cookbook 0.1.0 documentation

publications (hide)39
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1Maschinelles Lernen

2Pybel: a Python wrapper for the OpenBabel cheminformatics toolkit

3PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data

1MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics

3IPython: A System for Interactive Scientific Computing

1The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism.

2GPU-powered model analysis with PySB/cupSODA.

2Python data science handbook : essential tools for working with data

2Python data science handbook : essential tools for working with data

1Scikit-learn: Machine learning in Python

2COSMOS: Python library for massively parallel workflows

1Jython Essentials

6xUnit Test Patterns: Refactoring Test Code

6Programming the Semantic Web

2Learning Python

5Data Science from Scratch: First Principles with Python

4Kollektive Intelligenz analysieren, programmieren und nutzen

14Programming Collective Intelligence: Building Smart Web 2.0 Applications

1The Python Language Reference Manual

2Scikit-learn: Machine learning in Python

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