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1maltman's scientific software
http://maltman.hmdc.harvard.edu/numal/resources/
15 years ago by @ebo
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1Joel C. Miller
http://cnls.lanl.gov/~jomiller/
15 years ago by @ebo
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1Xue Xhong's webpage
http://www.webpages.uidaho.edu/%7Exue2500/
15 years ago by @ebo
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1ESA table of contents
http://www.esajournals.org/toc/ecol/90/4
15 years ago by @ebo
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2Prototype Packages for Managing and Animating Longitudinal Network Data: dynamicnetwork and rSoNIA
S. Bender-deMol, M. Morris, and J. Moody. Journal of Statistical Software, 24 (7): 1--36 (Dec 25, 2007)
14 years ago by @ebo
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R
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Rdatanetworkssoftware
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3Tools for loading MEDLINE into a local relational database.
D. Oliver, G. Bhalotia, A. Schwartz, R. Altman, and M. Hearst. BMC Bioinformatics, (October 2004)
15 years ago by @ebo
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1An exploratory study on the social and genotypic clustering of HIV infection in men having sex with men
S. Lee, D. Tam, Y. Tan, W. Mak, K. Wong, J. Chen, and W. Yam. AIDS, 23 (13): 1755-1764 (August 2009)
15 years ago by @ebo
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1A microsimulation study of the effect of concurrent partnerships on the spread of HIV in Uganda
M. Morris, and M. Kretzschmar. Mathematical Population Studies: An International Journal of Mathematical Demography, (2000)
15 years ago by @ebo
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HIVconcurrentimportednetwork
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1A Network Approach to Understanding Pathogen Population Structure
C. Buckee, and S. Gupta. Infectious Disease Informatics, (2010)
15 years ago by @ebo
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1Deterministic epidemiological models at the individual level
K. Sharkey. Journal of Mathematical Biology, 57 (3): 311--331 (September 2008)
15 years ago by @ebo
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1SIR dynamics in random networks with heterogeneous connectivity
E. Volz. Journal of Mathematical Biology, 56 (3): 293--310 (March 2008)
15 years ago by @ebo
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1Perspectives on the basic reproductive ratio
J. Heffernan, R. Smith, and L. Wahl. Journal of The Royal Society Interface, 2 (4): 281-293 (2005)
15 years ago by @ebo
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imported
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1Synchrony, waves, and spatial hierarchies in the spread of influenza
C. Viboud, O. Bjørnstad, D. Smith, L. Simonsen, M. Miller, and B. Grenfell. Science, 312 (5772): 447-451 (April 2006)
15 years ago by @ebo
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2The evolutionary dynamics of a rapidly mutating virus within and between hosts: the case of hepatitis C virus
F. Luciani, and S. Alizon. PLoS Comput Biol, (November 2009)
15 years ago by @ebo
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1Detecting robust patterns in the spread of epidemics: a case study of influenza in the United States and France
P. Crépey, and M. Barthélemy. Am J Epidemiol, 166 (11): 1244-1251 (December 2007)
15 years ago by @ebo
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1Evolution at a High Imposed Mutation Rate: Adaptation Obscures the Load in Phage T7
R. Springman, T. Keller, I. Molineux, and J. Bull. Genetics, (2009)
15 years ago by @ebo
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1Viral evolution under the pressure of an adaptive immune system - optimal mutation rates for viral escape
C. Kamp, C. Wilke, C. Adami, and S. Bornholdt. ArXiv Condensed Matter e-prints, (September 2002)
15 years ago by @ebo
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2Lethal mutagenesis in a structured environment
S. Steinmeyer, and C. Wilke. Journal of Theoretical Biology, 261 (1): 67--73 (2009)
15 years ago by @ebo
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@Plmut
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3Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
M. Hasegawa, H. Kishino, and T. aki Yano. Journal of Molecular Evolution, 22 (2): 160--174 (October 1985)
15 years ago by @ebo
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1Likelihood-Based Tests of Topologies in Phylogenetics
N. Goldman, J. Anderson, and A. Rodrigo. Systematic Biology, 49 (4): 652-670 (2000)
15 years ago by @ebo
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1Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis
J. Castresana. Moleculr Biology and Evolution, 17 (4): 540-552 (2000)
15 years ago by @ebo
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2An Improved General Amino Acid Replacement Matrix
S. Le, and O. Gascuel. Molecular Biology Evolution, 25 (7): 1307-1320 (2008)
15 years ago by @ebo
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4Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees
K. Liu, S. Raghavan, S. Nelesen, C. Linder, and T. Warnow. Science, (June 2009)
15 years ago by @ebo
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imported
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importedphylogenetics
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1Accuracy of Coalescent Likelihood Estimates: Do We Need More Sites, More Sequences, or More Loci?
J. Felsenstein. Molecular Biology Evolution, 23 (3): 691-700 (2006)
15 years ago by @ebo
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BibSonomy

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1maltman's scientific software

1Joel C. Miller

1Xue Xhong's webpage

1ESA table of contents

publications (hide)339
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2Prototype Packages for Managing and Animating Longitudinal Network Data: dynamicnetwork and rSoNIA

3Tools for loading MEDLINE into a local relational database.

1An exploratory study on the social and genotypic clustering of HIV infection in men having sex with men

1A microsimulation study of the effect of concurrent partnerships on the spread of HIV in Uganda

1A Network Approach to Understanding Pathogen Population Structure

1Deterministic epidemiological models at the individual level

1SIR dynamics in random networks with heterogeneous connectivity

1Perspectives on the basic reproductive ratio

1Synchrony, waves, and spatial hierarchies in the spread of influenza

2The evolutionary dynamics of a rapidly mutating virus within and between hosts: the case of hepatitis C virus

1Detecting robust patterns in the spread of epidemics: a case study of influenza in the United States and France

1Evolution at a High Imposed Mutation Rate: Adaptation Obscures the Load in Phage T7

1Viral evolution under the pressure of an adaptive immune system - optimal mutation rates for viral escape

2Lethal mutagenesis in a structured environment

3Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

1Likelihood-Based Tests of Topologies in Phylogenetics

1Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis

2An Improved General Amino Acid Replacement Matrix

4Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees

1Accuracy of Coalescent Likelihood Estimates: Do We Need More Sites, More Sequences, or More Loci?

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